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pip
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Metadata-Version: 2.4
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Name: pooch
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Version: 1.9.0
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Summary: A friend to fetch your data files
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Author-email: The Pooch Developers <fatiandoaterra@protonmail.com>
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Maintainer-email: Leonardo Uieda <leo@uieda.com>
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License-Expression: BSD-3-Clause
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Project-URL: Documentation, https://www.fatiando.org/pooch
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Project-URL: Changelog, https://www.fatiando.org/pooch/latest/changes.html
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Project-URL: Bug Tracker, https://github.com/fatiando/pooch/issues
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Project-URL: Source Code, https://github.com/fatiando/pooch
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Keywords: data,download,caching,http
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Classifier: Development Status :: 5 - Production/Stable
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Classifier: Intended Audience :: Science/Research
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Classifier: Intended Audience :: Developers
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Classifier: Intended Audience :: Education
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Classifier: Operating System :: OS Independent
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Classifier: Topic :: Scientific/Engineering
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Classifier: Topic :: Software Development :: Libraries
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Classifier: Typing :: Typed
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Classifier: Programming Language :: Python :: 3 :: Only
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Classifier: Programming Language :: Python :: 3.9
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Classifier: Programming Language :: Python :: 3.10
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Classifier: Programming Language :: Python :: 3.11
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Classifier: Programming Language :: Python :: 3.12
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Classifier: Programming Language :: Python :: 3.13
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Classifier: Programming Language :: Python :: 3.14
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Requires-Python: >=3.9
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Description-Content-Type: text/markdown
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License-File: LICENSE.txt
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License-File: AUTHORS.md
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Requires-Dist: platformdirs>=2.5.0
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Requires-Dist: packaging>=20.0
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Requires-Dist: requests>=2.19.0
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Provides-Extra: progress
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Requires-Dist: tqdm<5.0.0,>=4.41.0; extra == "progress"
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Provides-Extra: sftp
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Requires-Dist: paramiko>=2.7.0; extra == "sftp"
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Provides-Extra: xxhash
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Requires-Dist: xxhash>=1.4.3; extra == "xxhash"
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Provides-Extra: test
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Requires-Dist: pytest-httpserver; extra == "test"
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Requires-Dist: pytest-localftpserver; extra == "test"
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Dynamic: license-file
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<img src="https://github.com/fatiando/pooch/raw/main/doc/_static/readme-banner.png" alt="Pooch: A friend to fetch your data files">
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<p align="center">
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<a href="https://www.fatiando.org/pooch"><strong>Documentation</strong> (latest)</a> •
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<a href="https://www.fatiando.org/pooch/dev"><strong>Documentation</strong> (main branch)</a> •
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<a href="https://github.com/fatiando/pooch/blob/main/CONTRIBUTING.md"><strong>Contributing</strong></a> •
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<a href="https://www.fatiando.org/contact/"><strong>Contact</strong></a> •
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<a href="https://github.com/orgs/fatiando/discussions"><strong>Ask a question</strong></a>
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</p>
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<p align="center">
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Part of the <a href="https://www.fatiando.org"><strong>Fatiando a Terra</strong></a> project
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</p>
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<p align="center">
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<a href="https://pypi.python.org/pypi/pooch"><img src="http://img.shields.io/pypi/v/pooch.svg?style=flat-square" alt="Latest version on PyPI"></a>
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<a href="https://github.com/conda-forge/pooch-feedstock"><img src="https://img.shields.io/conda/vn/conda-forge/pooch.svg?style=flat-square" alt="Latest version on conda-forge"></a>
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<a href="https://codecov.io/gh/fatiando/pooch"><img src="https://img.shields.io/codecov/c/github/fatiando/pooch/main.svg?style=flat-square" alt="Test coverage status"></a>
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<a href="https://pypi.python.org/pypi/pooch"><img src="https://img.shields.io/pypi/pyversions/pooch.svg?style=flat-square" alt="Compatible Python versions."></a>
|
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<a href="https://doi.org/10.21105/joss.01943"><img src="https://img.shields.io/badge/doi-10.21105%2Fjoss.01943-blue?style=flat-square" alt="DOI used to cite Pooch"></a>
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</p>
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## About
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> Just want to download a file without messing with `requests` and `urllib`?
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> Trying to add sample datasets to your Python package?
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> **Pooch is here to help!**
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*Pooch* is a **Python library** that can manage data by **downloading files**
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from a server (only when needed) and storing them locally in a data **cache**
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(a folder on your computer).
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* Pure Python and minimal dependencies.
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* Download files over HTTP, FTP, and from data repositories like Zenodo and figshare.
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* Built-in post-processors to unzip/decompress the data after download.
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* Designed to be extended: create custom downloaders and post-processors.
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|
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Are you a **scientist** or researcher? Pooch can help you too!
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* Host your data on a repository and download using the DOI.
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* Automatically download data using code instead of telling colleagues to do it themselves.
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* Make sure everyone running the code has the same version of the data files.
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|
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## Projects using Pooch
|
||||
|
||||
[SciPy](https://github.com/scipy/scipy),
|
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[scikit-image](https://github.com/scikit-image/scikit-image),
|
||||
[xarray](https://github.com/pydata/xarray),
|
||||
[Ensaio](https://github.com/fatiando/ensaio),
|
||||
[GemPy](https://github.com/cgre-aachen/gempy),
|
||||
[MetPy](https://github.com/Unidata/MetPy),
|
||||
[napari](https://github.com/napari/napari),
|
||||
[Satpy](https://github.com/pytroll/satpy),
|
||||
[yt](https://github.com/yt-project/yt),
|
||||
[PyVista](https://github.com/pyvista/pyvista),
|
||||
[icepack](https://github.com/icepack/icepack),
|
||||
[histolab](https://github.com/histolab/histolab),
|
||||
[seaborn-image](https://github.com/SarthakJariwala/seaborn-image),
|
||||
[Open AR-Sandbox](https://github.com/cgre-aachen/open_AR_Sandbox),
|
||||
[climlab](https://github.com/climlab/climlab),
|
||||
[mne-python](https://github.com/mne-tools/mne-python),
|
||||
[GemGIS](https://github.com/cgre-aachen/gemgis),
|
||||
[SHTOOLS](https://github.com/SHTOOLS/SHTOOLS),
|
||||
[MOABB](https://github.com/NeuroTechX/moabb),
|
||||
[GeoViews](https://github.com/holoviz/geoviews),
|
||||
[ScopeSim](https://github.com/AstarVienna/ScopeSim),
|
||||
[Brainrender](https://github.com/brainglobe/brainrender),
|
||||
[pyxem](https://github.com/pyxem/pyxem),
|
||||
[cellfinder](https://github.com/brainglobe/cellfinder),
|
||||
[PVGeo](https://github.com/OpenGeoVis/PVGeo),
|
||||
[geosnap](https://github.com/oturns/geosnap),
|
||||
[BioCypher](https://github.com/biocypher/biocypher),
|
||||
[cf-xarray](https://github.com/xarray-contrib/cf-xarray),
|
||||
[Scirpy](https://github.com/scverse/scirpy),
|
||||
[rembg](https://github.com/danielgatis/rembg),
|
||||
[DASCore](https://github.com/DASDAE/dascore),
|
||||
[scikit-mobility](https://github.com/scikit-mobility/scikit-mobility),
|
||||
[Py-ART](https://github.com/ARM-DOE/pyart),
|
||||
[HyperSpy](https://github.com/hyperspy/hyperspy),
|
||||
[RosettaSciIO](https://github.com/hyperspy/rosettasciio),
|
||||
[eXSpy](https://github.com/hyperspy/exspy),
|
||||
[SPLASH](https://github.com/Adam-Boesky/astro_SPLASH),
|
||||
[xclim](https://github.com/Ouranosinc/xclim),
|
||||
[CLISOPS](https://github.com/roocs/clisops),
|
||||
[scXpand](https://github.com/yizhak-lab-ccg/scXpand)
|
||||
|
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> If you're using Pooch, **send us a pull request** adding your project to the list.
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## Example
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For a **scientist downloading a data file** for analysis:
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```python
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import pooch
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import pandas as pd
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# Download a file and save it locally, returning the path to it.
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# Running this again will not cause a download. Pooch will check the hash
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# (checksum) of the downloaded file against the given value to make sure
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# it's the right file (not corrupted or outdated).
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fname_bathymetry = pooch.retrieve(
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url="https://github.com/fatiando-data/caribbean-bathymetry/releases/download/v1/caribbean-bathymetry.csv.xz",
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known_hash="md5:a7332aa6e69c77d49d7fb54b764caa82",
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)
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# Pooch can also download based on a DOI from certain providers.
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fname_gravity = pooch.retrieve(
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url="doi:10.5281/zenodo.5882430/southern-africa-gravity.csv.xz",
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known_hash="md5:1dee324a14e647855366d6eb01a1ef35",
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)
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# Load the data with Pandas
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data_bathymetry = pd.read_csv(fname_bathymetry)
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data_gravity = pd.read_csv(fname_gravity)
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```
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For **package developers** including sample data in their projects:
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```python
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"""
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Module mypackage/datasets.py
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"""
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from importlib import resources
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import pandas
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import pooch
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# Get the version string from your project. You have one of these, right?
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from . import version
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# Create a new friend to manage your sample data storage
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GOODBOY = pooch.create(
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# Folder where the data will be stored. For a sensible default, use the
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# default cache folder for your OS.
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path=pooch.os_cache("mypackage"),
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# Base URL of the remote data store. Will call .format on this string
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# to insert the version (see below).
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base_url="https://github.com/myproject/mypackage/raw/{version}/data/",
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# Pooches are versioned so that you can use multiple versions of a
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# package simultaneously. Use PEP440 compliant version number. The
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# version will be appended to the path.
|
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version=version,
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# If a version as a "+XX.XXXXX" suffix, we'll assume that this is a dev
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# version and replace the version with this string.
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version_dev="main",
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# An environment variable that overwrites the path.
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env="MYPACKAGE_DATA_DIR",
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# The cache file registry. A dictionary with all files managed by this
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# pooch. Keys are the file names (relative to *base_url*) and values
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# are their respective SHA256 hashes. Files will be downloaded
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# automatically when needed (see fetch_gravity_data).
|
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registry={"gravity-data.csv": "89y10phsdwhs09whljwc09whcowsdhcwodcydw"}
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)
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# You can also load the registry from a file. Each line contains a file
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# name and it's sha256 hash separated by a space. This makes it easier to
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# manage large numbers of data files. The registry file should be packaged
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# and distributed with your software.
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GOODBOY.load_registry(
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resources.open_text("mypackage", "registry.txt")
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)
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|
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# Define functions that your users can call to get back the data in memory
|
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def fetch_gravity_data():
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"""
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Load some sample gravity data to use in your docs.
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"""
|
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# Fetch the path to a file in the local storage. If it's not there,
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# we'll download it.
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fname = GOODBOY.fetch("gravity-data.csv")
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# Load it with numpy/pandas/etc
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data = pandas.read_csv(fname)
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return data
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```
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## Getting involved
|
||||
|
||||
🗨️ **Contact us:**
|
||||
Find out more about how to reach us at
|
||||
[fatiando.org/contact](https://www.fatiando.org/contact/).
|
||||
|
||||
👩🏾💻 **Contributing to project development:**
|
||||
Please read our
|
||||
[Contributing Guide](https://github.com/fatiando/pooch/blob/main/CONTRIBUTING.md)
|
||||
to see how you can help and give feedback.
|
||||
|
||||
🧑🏾🤝🧑🏼 **Code of conduct:**
|
||||
This project is released with a
|
||||
[Code of Conduct](https://github.com/fatiando/community/blob/main/CODE_OF_CONDUCT.md).
|
||||
By participating in this project you agree to abide by its terms.
|
||||
|
||||
> **Imposter syndrome disclaimer:**
|
||||
> We want your help. **No, really.** There may be a little voice inside your
|
||||
> head that is telling you that you're not ready, that you aren't skilled
|
||||
> enough to contribute. We assure you that the little voice in your head is
|
||||
> wrong. Most importantly, **there are many valuable ways to contribute besides
|
||||
> writing code**.
|
||||
>
|
||||
> *This disclaimer was adapted from the*
|
||||
> [MetPy project](https://github.com/Unidata/MetPy).
|
||||
|
||||
## License
|
||||
|
||||
This is free software: you can redistribute it and/or modify it under the terms
|
||||
of the **BSD 3-clause License**. A copy of this license is provided in
|
||||
[`LICENSE.txt`](https://github.com/fatiando/pooch/blob/main/LICENSE.txt).
|
||||
@@ -0,0 +1,57 @@
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pooch-1.9.0.dist-info/INSTALLER,sha256=zuuue4knoyJ-UwPPXg8fezS7VCrXJQrAP7zeNuwvFQg,4
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||||
pooch-1.9.0.dist-info/licenses/LICENSE.txt,sha256=rwSC1Z_HqdaNn2RoLHTObopGhEBrs6IaGRrjKZUJFrQ,1496
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pooch/__pycache__/_version.cpython-312.pyc,,
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|
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||||
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pooch/tests/__pycache__/test_core.cpython-312.pyc,,
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pooch/tests/__pycache__/test_downloaders.cpython-312.pyc,,
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pooch/tests/__pycache__/test_hashes.cpython-312.pyc,,
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pooch/tests/__pycache__/test_integration.cpython-312.pyc,,
|
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pooch/tests/__pycache__/test_processors.cpython-312.pyc,,
|
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pooch/tests/__pycache__/test_utils.cpython-312.pyc,,
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pooch/tests/__pycache__/utils.cpython-312.pyc,,
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||||
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||||
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|
||||
pooch/tests/test_processors.py,sha256=ExOsUdW1T6qjBvhF4pL_kITJ5WM2zq9CHGioM5nj2pM,11101
|
||||
pooch/tests/test_utils.py,sha256=g4ujEul7HhZHNHUZ-riWRuFJVA3di7IGpTN3vYKXF9Q,6452
|
||||
pooch/tests/test_version.py,sha256=RVw3MpWw6P6jB1Ap2Shx64zEs1a6NBP2cRFT097XDy8,545
|
||||
pooch/tests/utils.py,sha256=llkfzkgmJt12ENIQmpvWLQnrqgFrXdw8TF_XZFZ1bzk,6769
|
||||
pooch/typing/__init__.py,sha256=8wnKWTLJQRSEEc1c7n1R5LhBr-r7PSr9oMXbgX9OKHU,1582
|
||||
pooch/typing/__pycache__/__init__.cpython-312.pyc,,
|
||||
pooch/utils.py,sha256=r1wIijA_bmU-tBYG6WM5TSyVQDyPQZtbBc6xks7m92k,10912
|
||||
@@ -0,0 +1,5 @@
|
||||
Wheel-Version: 1.0
|
||||
Generator: setuptools (80.10.2)
|
||||
Root-Is-Purelib: true
|
||||
Tag: py3-none-any
|
||||
|
||||
@@ -0,0 +1,25 @@
|
||||
# Project Authors
|
||||
|
||||
The following people have made contributions to the project (in alphabetical
|
||||
order by last name) and are considered "The Pooch Developers":
|
||||
|
||||
* [Anderson Banihirwe](https://github.com/andersy005) - The US National Center for Atmospheric Research, USA (ORCID: [0000-0001-6583-571X](https://orcid.org/0000-0001-6583-571X))
|
||||
* [Genevieve Buckley](https://github.com/GenevieveBuckley) - Monash University, Australia - (ORCID: [0000-0003-2763-492X](https://orcid.org/0000-0003-2763-492X))
|
||||
* [Luke Gregor](https://github.com/lukegre) - Environmental Physics, ETH Zurich, Zurich, Switzerland (ORCID: [0000-0001-6071-1857](https://orcid.org/0000-0001-6071-1857))
|
||||
* [Mathias Hauser](https://github.com/mathause) - Institute for Atmospheric and Climate Science, ETH Zurich, Zurich, Switzerland (ORCID: [0000-0002-0057-4878](https://orcid.org/0000-0002-0057-4878))
|
||||
* [Mark Harfouche](https://github.com/hmaarrfk) - Ramona Optics Inc. - [0000-0002-4657-4603](https://orcid.org/0000-0002-4657-4603)
|
||||
* [Danilo Horta](https://github.com/horta) - EMBL-EBI, UK
|
||||
* [Hugo van Kemenade](https://github.com/hugovk) - Independent (Non-affiliated) (ORCID: [0000-0001-5715-8632](https://www.orcid.org/0000-0001-5715-8632))
|
||||
* [Dominic Kempf](https://github.com/dokempf) - Scientific Software Center, Heidelberg University, Germany (ORCID: [0000-0002-6140-2332](https://www.orcid.org/0000-0002-6140-2332))
|
||||
* [Kacper Kowalik](https://github.com/Xarthisius) - National Center for Supercomputing Applications, University of Illinois at Urbana-Champaign, USA (ORCID: [0000-0003-1709-3744](https://www.orcid.org/0000-0003-1709-3744))
|
||||
* [John Leeman](https://github.com/jrleeman)
|
||||
* [Björn Ludwig](https://github.com/BjoernLudwigPTB) - Physikalisch-Technische Bundesanstalt, Germany (ORCID: [0000-0002-5910-9137](https://www.orcid.org/0000-0002-5910-9137))
|
||||
* [Daniel McCloy](https://github.com/drammock) - University of Washington, USA (ORCID: [0000-0002-7572-3241](https://orcid.org/0000-0002-7572-3241))
|
||||
* [Juan Nunez-Iglesias](https://github.com/jni) - Monash University, Australia (ORCID: [0000-0002-7239-5828](https://orcid.org/0000-0002-7239-5828))
|
||||
* [Rémi Rampin](https://github.com/remram44) - New York University, USA (ORCID: [0000-0002-0524-2282](https://www.orcid.org/0000-0002-0524-2282))
|
||||
* [Clément Robert](https://github.com/neutrinoceros) - Institut de Planétologie et d'Astrophysique de Grenoble, France (ORCID: [0000-0001-8629-7068](https://orcid.org/0000-0001-8629-7068))
|
||||
* [Daniel Shapero](https://github.com/danshapero) - Polar Science Center, University of Washington Applied Physics Lab, USA (ORCID: [0000-0002-3651-0649](https://www.orcid.org/0000-0002-3651-0649))
|
||||
* [Santiago Soler](https://github.com/santisoler) - Department of Earth, Ocean and Atmospheric Sciences, University of British Columbia (ORCID: 0000-0001-9202-5317)
|
||||
* [Matthew Turk](https://github.com/matthewturk) - University of Illinois at Urbana-Champaign, USA (ORCID: [0000-0002-5294-0198](https://www.orcid.org/0000-0002-5294-0198))
|
||||
* [Leonardo Uieda](https://github.com/leouieda) - Universidade de São Paulo, Brazil (ORCID: [0000-0001-6123-9515](https://www.orcid.org/0000-0001-6123-9515))
|
||||
* [Antonio Valentino](https://github.com/avalentino)
|
||||
@@ -0,0 +1,25 @@
|
||||
Copyright (c) 2018 The Pooch Developers
|
||||
All rights reserved.
|
||||
|
||||
Redistribution and use in source and binary forms, with or without modification,
|
||||
are permitted provided that the following conditions are met:
|
||||
|
||||
* Redistributions of source code must retain the above copyright notice,
|
||||
this list of conditions and the following disclaimer.
|
||||
* Redistributions in binary form must reproduce the above copyright notice,
|
||||
this list of conditions and the following disclaimer in the documentation
|
||||
and/or other materials provided with the distribution.
|
||||
* Neither the name of the copyright holders nor the names of any contributors
|
||||
may be used to endorse or promote products derived from this software
|
||||
without specific prior written permission.
|
||||
|
||||
THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" AND
|
||||
ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED
|
||||
WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE
|
||||
DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE FOR
|
||||
ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES
|
||||
(INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES;
|
||||
LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON
|
||||
ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT
|
||||
(INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS
|
||||
SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
|
||||
@@ -0,0 +1 @@
|
||||
pooch
|
||||
Reference in New Issue
Block a user